In this video we recommend flowSOM as the algorithm most suitable for performing clustering on Cytometry data. We discuss the research which underpins our recommendation and use Tercen to generate a Minimum Spanning Tree for visualising flowSOM clusters.
Table of Contents:
00:00 - Introduction
00:28 - Comparison of clustering algorithms
01:39 - Introduction to flowSOM
02:31 - Using flowSOm in workflows
03:06 - flowSOM Minimum Spanning Tree
03:44 - Using flowSOM with dimention reduction